DNAzyme_8-17.vrt.sol.filN.REP.CS.html
LEGEND @ -> Complement
* -> POS included in the interval of this feature
$ -> POS included in the interval of this feature but with overlap
--- AAU83759 Aegolius acadicus 12S mitochondrial ribosomal RNA, small subunit, --- (986 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:121-146|MIS: 0|WOB: 0|
|GCGUCUU|GGG|CUA|CCC|ACGAUGGCUA|
--- AB001869 Anolis carolinensis Brain-2 gene, complete cds. --- (2954 bases)
|SCO: 0.19|POS:1525-1552|MIS: 0|WOB: 0|
### * CDS 924..2267
|ACGGCCU|GCG|GGAGG|CGC|ACGAGGAGCC|
--- AB001935 Chicken mRNA for proteasome C1 subunit, partial cds. --- (818 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:107-139|MIS: 0|WOB: 0|
|GGCAGAU|CCG|CGCCGCCCCA|CGG|ACGAACCGCC|
--- AB001938 Cynops pyrrhogaster goosecoid mRNA, complete cds. --- (866 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:756-784|MIS: 0|WOB: 0|
|GUGUUUU|CGG|ACUCCU|CCG|ACGAGGACCG|
--- AB004291 Gallus gallus mRNA for enolase, complete cds. --- (2273 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:122-147|MIS: 0|WOB: 0|
|CUACAGU|GGG|GUU|CCC|ACGAGAAUCC|
--- AB005300 Coturnix japonica mRNA for histocompatibility complex class 1 --- (1197 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:707-739|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCUGUUG|GGC|ACGAUGCCCC|
--- AB006953 Carassius auratus langsdorfi mitochondrial DNA, complete sequence. --- (16578 bases)
|SCO: 0.17|POS:1068-1098|MIS: 0|WOB: 0|
### * rRNA 991..1944
|CCUCAAU|CCC|CCUACCCG|GGG|ACGAGGAGCG|
--- AB011672 Gallus gallus mRNA for desmin, partial cds. --- (1345 bases)
|SCO: 0.16|POS:952-980|MIS: 0|WOB: 0|
### * CDS 1..1345
|GAUCGAU|GCC|CUCAAG|GGC|ACGAACGACU|
--- AB016661 Theragra chalcogramma gene for 18S rRNA, partial sequence. --- (215 bases)
|SCO: 0.19|POS:177-209|MIS: 0|WOB: 0|
### * rRNA 1..215
|GAUCGCU|CGC|CCUCGCGGCG|GCG|ACGACUCAUU|
|SCO: 0.19|POS:183-209|MIS: 0|WOB: 0|
### * rRNA 1..215
|UCGCCCU|CGC|GGCG|GCG|ACGACUCAUU|
--- ABU34340 Acipenser brevirostrum 28S ribosomal RNA gene, partial sequence. --- (3432 bases)
|SCO: 0.19|POS:1561-1593|MIS: 0|WOB: 0|
### * rRNA 1..3432
|GGAGCCU|CGC|AGGCUAUGCC|GCG|ACGAGUAGGA|
--- ACU23958 Aphelocoma coerulescens isolate 2.2 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23959 Aphelocoma coerulescens isolate 2.3 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAAU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23960 Aphelocoma coerulescens isolate 2.4 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23961 Aphelocoma coerulescens isolate 3.1 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23962 Aphelocoma coerulescens isolate 3.2 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23963 Aphelocoma coerulescens isolate 3.3 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23964 Aphelocoma coerulescens isolate 3.4 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23965 Aphelocoma coerulescens isolate 3.5 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23966 Aphelocoma coerulescens isolate 3.6 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23972 Aphelocoma coerulescens isolate 1.1 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23973 Aphelocoma coerulescens isolate 1.2 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- ACU23975 Aphelocoma coerulescens isolate 2.1 MHC class II B mRNA, partial --- (599 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:443-470|MIS: 0|WOB: 0|
|GUCCAGU|CCC|CGUUG|GGG|ACGAUGUCGG|
--- AF009947 Amphilophus alfari-ba cytochrome b (cytb) gene, mitochondrial gene --- (1137 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:377-408|MIS: 0|WOB: 0|
|UCCUCAU|GGG|AGGACAUAG|CCC|ACGAAAGCAG|
--- AF012125 Salmo salar beta actin mRNA, complete cds. --- (1128 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:102-132|MIS: 0|WOB: 0|
|CAUCACU|CCC|UGAUGCCU|GGG|ACGACCGACG|
--- AF013491 Gallus gallus MHC class I B-FIV glycoprotein (B5 allele) mRNA, --- (1262 bases)
|SCO: 0.16|POS:445-476|MIS: 0|WOB: 0|
### * gene 1..1262
### * CDS 26..1093
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- AF013491 Gallus gallus MHC class I B-FIV glycoprotein (B5 allele) mRNA, --- (1262 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:768-800|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- AF013492 Gallus gallus MHC class I B-FIV glycoprotein (B2 allele) mRNA, --- (1262 bases)
|SCO: 0.16|POS:445-476|MIS: 0|WOB: 0|
### * gene 1..1262
### * CDS 26..1093
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- AF013492 Gallus gallus MHC class I B-FIV glycoprotein (B2 allele) mRNA, --- (1262 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:768-800|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- AF013493 Gallus gallus MHC class I B-FIV glycoprotein (B21 allele) mRNA, --- (1262 bases)
|SCO: 0.16|POS:445-476|MIS: 0|WOB: 0|
### * gene 1..1262
### * CDS 26..1093
|CUUCGUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- AF013493 Gallus gallus MHC class I B-FIV glycoprotein (B21 allele) mRNA, --- (1262 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:768-800|MIS: 0|WOB: 0|
|GGUACGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- AF013494 Gallus gallus MHC class I B-FIV glycoprotein (B13 allele) mRNA, --- (1262 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:768-800|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- AF013495 Gallus gallus MHC class I B-FIV glycoprotein (B17 allele) mRNA, --- (1145 bases)
|SCO: 0.16|POS:445-476|MIS: 0|WOB: 0|
### * gene 1..1145
### * CDS 26..1093
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- AF013495 Gallus gallus MHC class I B-FIV glycoprotein (B17 allele) mRNA, --- (1145 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:768-800|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- AF013614 Fugu rubripes cosmid 259C6, complete sequence. --- (55892 bases)
|SCO: 0.16|POS:26790-26816|MIS: 0|WOB: 0|
|GCAAAAU|GGC|UGCU|GCC|ACGACAUAAG|
--- AF017177 Xenopus laevis frizzled 8 protein (Xfz8) mRNA, complete cds. --- (1851 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1465-1497|MIS: 0|WOB: 0|
|GGGCUGU|GCC|AUUUCGGGUU|GGC|ACGAGUUACA|
--- AF022814 Fugu rubripes transcription factor (SLP-1) and heme-oxygenase --- (37400 bases)
|SCO: 0.19|POS:6331-6356|MIS: 0|WOB: 0|
|AGGGCGU|GCG|CGG|CGC|ACGAGCGCAG|
|SCO: 0.19|POS:19337-19364|MIS: 0|WOB: 0|
### * gene 16863..19365
### * mRNA 18851..19365
### * CDS 18851..19365
|UGGUGGU|CGC|CACGA|GCG|ACGAGCGGUG|
--- AF023183 Acrocheilus alutaceus 12S ribosomal RNA gene, mitochondrial gene --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023184 Campostoma anomalum 12S ribosomal RNA gene, mitochondrial gene for --- (956 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUCAAU|CCC|CUGCCCG|GGG|ACGAGGAGCA|
--- AF023185 Couesius plumbeus isolate UAIC 11367.01 12S ribosomal RNA gene, --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023186 Couesius plumbeus isolate UIAC 11366.01 12S ribosomal RNA gene, --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023187 Cyprinella venusta 12S ribosomal RNA gene, mitochondrial gene for --- (954 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCA|
--- AF023188 Gila cypha 12S ribosomal RNA gene, mitochondrial gene for --- (954 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023189 Hemitremia flammea isolate UAIC 10687.01 12S ribosomal RNA gene, --- (952 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..952
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023190 Hemitremia flammea isolate UAIC 10697.01 12S ribosomal RNA gene, --- (952 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..952
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023191 Lepidomeda vittata 12S ribosomal RNA gene, mitochondrial gene for --- (952 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..952
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023192 Margariscus margarita 12S ribosomal RNA gene, mitochondrial gene --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023193 Meda fulgida 12S ribosomal RNA gene, mitochondrial gene for --- (953 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..953
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023194 Notemigonus crysoleucas 12S ribosomal RNA gene, mitochondrial gene --- (953 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..953
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023195 Notropis atherinoides 12S ribosomal RNA gene, mitochondrial gene --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCA|
--- AF023197 Platygobio gracilis 12S ribosomal RNA gene, mitochondrial gene for --- (955 bases)
|SCO: 0.17|POS:78-106|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CCGCCC|GGG|ACGAGGAGCA|
--- AF023198 Rhinichthys atratulus 12S ribosomal RNA gene, mitochondrial gene --- (956 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUCAAU|CCC|CUGCCCG|GGG|ACGAGGAGCA|
--- AF023199 Semotilus atromaculatus 12S ribosomal RNA gene, mitochondrial gene --- (955 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023200 Semotilus thoreauianus 12S ribosomal RNA gene, mitochondrial gene --- (954 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF023201 Snyderichthys copei 12S ribosomal RNA gene, mitochondrial gene for --- (956 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF025305 Danio rerio beta actin mRNA, complete cds. --- (1143 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:101-127|MIS: 0|WOB: 0|
|GAUGUCU|GGG|GCGA|CCC|ACGAUGGAUG|
--- AF030031 Danio rerio DeltaA (deltaA) mRNA, complete cds. --- (3051 bases)
|SCO: 0.16|POS:1876-1905|MIS: 0|WOB: 0|
### * gene 1..3051
### * CDS 287..2695
|CCACAAU|GGC|GCCACUU|GCC|ACGAAAGGAA|
--- AF031831 Gallus gallus 7-transmembrane protein frizzled-7 (Fz-7) mRNA, --- (1727 bases)
|SCO: 0.16|POS:1085-1117|MIS: 0|WOB: 0|
### * gene 1..1727
### * CDS 15..1718
|GGCGGCU|GGC|AUGAAGUGGG|GCC|ACGAAGCCAU|
--- AF032390 Danio rerio LMP7 mRNA, complete cds. --- (816 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:666-697|MIS: 0|WOB: 0|
|UAUGUGU|GGC|GUGAGCGAU|GCC|ACGACGGCCG|
--- AF035443 Xenopus laevis wee1 homolog mRNA, complete cds. --- (2029 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:908-939|MIS: 0|WOB: 0|
|CGCCCAU|GCG|GAGUAAUAA|CGC|ACGACAUGGG|
--- AF038468 Abramis bjoerkna 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2717 bases)
|SCO: 0.17|POS:78-108|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUUAAU|CCC|CCACCCCG|GGG|ACGAGGAGCG|
--- AF038471 Eremichthys acros 12S ribosomal RNA and tRNA-Val genes, complete --- (2655 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038472 Gila atraria 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2718 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038473 Gila coerulea specimen 1 12S ribosomal RNA, tRNA-Val and 16S --- (2716 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038474 Gila coerulea specimen 2 12S ribosomal RNA, tRNA-Val and 16S --- (2716 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038475 Gila conspersa 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2718 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038476 Gila ditaenia 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2720 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038478 Gila nigrescens 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2717 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038479 Gila orcutti 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2719 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038480 Gila pandora 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2718 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038481 Gila robusta 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2718 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038482 Lavinia exilicauda specimen 1 12S ribosomal RNA, tRNA-Val and 16S --- (2716 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038483 Lavinia exilicauda specimen 2 12S ribosomal RNA, tRNA-Val and 16S --- (2717 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038484 Leuciscus rutilus 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2717 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038488 Orthodon microlepidotus specimen 1 12S ribosomal RNA, tRNA-Val and --- (2721 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..958
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038489 Orthodon microlepidotus specimen 2 12S ribosomal RNA, tRNA-Val and --- (2721 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..958
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038490 Phoxinus erythrogaster 12S ribosomal RNA gene, partial sequence; --- (2661 bases)
|SCO: 0.17|POS:28-57|MIS: 0|WOB: 0|
### * rRNA 1..905
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038493 Phoxinus neogaeus 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA --- (2714 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..956
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038494 Ptychocheilus oregonensis 12S ribosomal RNA, tRNA-Val and 16S --- (2718 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..954
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038496 Relictus solitarius 12S ribosomal RNA, tRNA-Val and 16S ribosomal --- (2717 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038497 Siphateles bicolor 12S ribosomal RNA, tRNA-Val and 16S ribosomal --- (2712 bases)
|SCO: 0.17|POS:78-107|MIS: 0|WOB: 0|
### * rRNA 1..955
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCG|
--- AF038555 Gallus gallus laminin beta 2-like chain mRNA, complete cds. --- (5634 bases)
|SCO: 0.17|POS:1693-1720|MIS: 0|WOB: 0|
### * CDS 123..5501
|GUGACGU|GGG|AGGUG|CCC|ACGACAACCA|
--- AF038882 Calloselasma rhodostoma cytochrome b (cytb) gene, mitochondrial --- (642 bases)
|SCO: 0.17|POS:609-634|MIS: 0|WOB: 0|
### * gene 1..642
### * CDS 1..642
|CAACAAU|CCC|CUA|GGG|ACGAACUCAG|
--- AF041355 Gallus gallus ecto-ATP-diphosphohydrolase mRNA, complete cds. --- (1570 bases)
|SCO: 0.16|POS:98-124|MIS: 0|WOB: 0|
### * CDS 1..1482
|UGUUUCU|GCC|UCCU|GGC|ACGAAGUACG|
--- AF043384 Pleuronectes americanus beta actin (ACT1) mRNA, partial cds. --- (466 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:172-198|MIS: 0|WOB: 0|
|GGUGUCU|GGG|GCGG|CCC|ACGAUGGACG|
--- AF043385 Pleuronectes americanus beta actin (ACT1) gene, partial cds. --- (661 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:105-131|MIS: 0|WOB: 0|
|GGUGUCU|GGG|GCGG|CCC|ACGAUGGACG|
--- AF061800 Squalus acanthias internal transcribed spacer 2; and 28S ribosomal --- (3650 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:801-830|MIS: 0|WOB: 0|
|UAACACU|CGC|CGCCGGA|GCG|ACGAGCCACC|
--- AF072456 Danio rerio bone morphogenetic protein 2 (bmp2) mRNA, complete cds. --- (1732 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1355-1380|MIS: 0|WOB: 0|
|AUAGCCU|GGC|GGU|GCC|ACGAUCCACU|
--- AF083440 Gallus gallus collagen XVIII mRNA, partial cds. --- (2400 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:781-813|MIS: 0|WOB: 0|
|CAGCAGU|GCG|GUCGGCCCUG|CGC|ACGAUGCUGU|
--- AMTMSX1P Ambystoma mexicanum mRNA for Msx1 protein, complete cds. --- (1601 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1488-1520|MIS: 0|WOB: 0|
|UACGGAU|CCC|CUGCUCCCAA|GGG|ACGAGUGUAG|
--- BRZFKRX2A B.rerio zf Krx-20 mRNA. --- (1903 bases)
|SCO: 0.19|POS:1126-1153|MIS: 0|WOB: 0|
### * gene 36..1274
### * CDS 36..1274
### * misc_feature 915..1172
|GAAAGUU|CGC|GAGGA|GCG|ACGAAAGAAA|
--- BUJMTCYTBH Bufo calamita (MVZ FC 12016) mitochondrial cytochrome b gene, --- (483 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:317-348|MIS: 0|WOB: 0|
|ACCUCAU|GGG|AGGACAUAG|CCC|ACGAAUGCUG|
--- BUJMTCYTBI Bufo calamita (MVZ FC 12017) mitochondrial cytochrome b gene, --- (372 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:212-243|MIS: 0|WOB: 0|
|ACCUCAU|GGG|AGGACAUAG|CCC|ACGAAUGCUG|
--- CAA3NNAR Goldfish GF alpha-3 mRNA for neural nicotinic acetylcholine --- (1768 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:1192-1218|MIS: 0|WOB: 0|
|UCCUCCU|CCG|GUCC|CGG|ACGAGCCCGC|
--- CCQUEK2 C.coturnix Quek2 mRNA for vascular endothelial growth factor --- (4617 bases)
|SCO: 0.17|POS:2593-2619|MIS: 0|WOB: 0|
### * gene 49..4188
### * CDS 49..4188
### $ misc_feature 2614..3579
|AGCAAGU|GGG|AAUU|CCC|ACGAGACCGC|
--- CCTROPOM2 C.coturnix japonica gene for cardiac and cytoskeletal tropomyosin, --- (3497 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:2571-2603|MIS: 0|WOB: 0|
|GAAAGCU|GGG|GGCUGCGGGU|CCC|ACGACAGCAC|
--- CCU81506 Cyprinus carpio junB transcription factor mRNA, complete cds. --- (1497 bases)
|SCO: 0.20|POS:395-424|MIS: 0|WOB: 0|
### * CDS 126..1052
|CUACAGU|CGG|GGGAUCA|CCG|ACGAGCAGGA|
--- CCU87963 Cyprinus carpio 18S ribosomal RNA gene, partial sequence, internal --- (4763 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:2272-2303|MIS: 0|WOB: 0|
|AGGACCU|CCG|GUCCUCGCG|CGG|ACGAGGCGCC|
--- CHKACBI Chicken embryonic cytoplasmic beta-actin mRNA. --- (264 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:101-127|MIS: 0|WOB: 0|
|GAUGUCU|GGG|GCGA|CCC|ACGAUAGAUG|
--- CHKACHR Chicken acetylcholine receptor beta subunit mRNA, partial cds. --- (355 bases)
|SCO: 0.17|POS:248-273|MIS: 0|WOB: 0|
### * CDS 1..355
### * mat_peptide 47..355
|CUGCAGU|GGG|ACC|CCC|ACGAUUAUGG|
--- CHKACRIPHO Chicken acidic ribosomal phosphoprotein (P0) mRNA, complete cds. --- (991 bases)
|SCO: 0.20|POS:924-952|MIS: 0|WOB: 0|
### * gene 24..974
### * CDS 24..974
|GAGGAAU|CGG|AGGAGU|CCG|ACGAGGAUAU|
--- CHKASMA Chicken alpha-smooth muscle (aortic) actin gene, complete cds. --- (11007 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:3457-3483|MIS: 0|WOB: 0|
|GGUGCCU|GGG|ACGA|CCC|ACGAUGGAAG|
--- CHKBACTN Gallus gallus beta-actin mRNA, complete cds. --- (1736 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:163-189|MIS: 0|WOB: 0|
|GAUGUCU|GGG|GCGA|CCC|ACGAUAGAUG|
--- CHKCGSCND Chicken chondrocyte specific short collagen, encoding HMW/LMW --- (3164 bases)
|SCO: 0.16|POS:1613-1643|MIS: 0|WOB: 0|
### * mRNA 1..3164
### * CDS 1..2219
|ACUGCCU|GGC|AUGGAAGG|GCC|ACGAGGUGCA|
--- CHKCOLAVI Chicken alpha-3 collagen type VI mRNA, 3' end. --- (10057 bases)
|SCO: 0.16|POS:5632-5664|MIS: 0|WOB: 0|
### * CDS 267..9680
### * mat_peptide 342..9677
|GCAAGUU|GGC|CAGCGAGAGU|GCC|ACGAGUUUCA|
--- CHKDEBPDA Chicken drebrin mRNA. --- (2102 bases)
|SCO: 0.16|POS:518-549|MIS: 0|WOB: 0|
### * CDS 60..1883
|CGAGAAU|GCC|GAGCCCGUG|GGC|ACGACCUACC|
--- CHKEGFR Chicken epidermal growth factor receptor (CER) mRNA, 5' end. --- (2400 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:2330-2356|MIS: 0|WOB: 0|
|GCAGGGU|GCG|CUUC|CGC|ACGAUAUGAC|
--- CHKEN2A01 Gallus gallus engrailed protein (En-2) gene, 5' end. --- (1100 bases)
|SCO: 0.19|POS:526-554|MIS: 0|WOB: 0|
### $ CDS 548..1100
|AGCCGCU|GCG|GGGCCG|CGC|ACGAUGGAGG|
--- CHKERBBF Chicken c-erbB oncogene mRNA activated by ALV insertion, producing --- (6563 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:772-798|MIS: 0|WOB: 0|
|GCAGGGU|GCG|CUUC|CGC|ACGAUAUGAC|
--- CHKLYSTR2 chicken embryo lys-trna-2 gene and promoter. --- (379 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:250-279|MIS: 0|WOB: 0|
|CCAACGU|GGG|GCUCGAA|CCC|ACGACCCUGA|
--- CHKMARKS Chicken myristoylated alanine-rich C kinase substrate (MARCKS) --- (1506 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:243-274|MIS: 0|WOB: 0|
|UCCUUCU|CGG|AGGCGGGCU|CCG|ACGAGGCCGC|
--- CHKMAX Gallus gallus (max) gene, complete cds. --- (5698 bases)
|SCO: 0.20|POS:4519-4544|MIS: 0|WOB: 0|
### * gene 2091..4578
### * CDS 4391..4578
### * exon 4391..4578
|UCCGACU|CGG|AGC|CCG|ACGAGCCACA|
--- CHKMHBFVB Chicken MHC class I B-FIV-B12 alpha-chain gene, complete cds. --- (4790 bases)
|SCO: 0.16|POS:2172-2203|MIS: 0|WOB: 0|
### * prim_transcript 1347..3587
### * prim_transcript 1379..3587
### * CDS 2081..2353
### * exon 2081..2353
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- CHKMHBFVB Chicken MHC class I B-FIV-B12 alpha-chain gene, complete cds. --- (4790 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:2598-2630|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- CHKMHC1AA Chicken MHC class I alpha-chain mRNA, 3' end. --- (1312 bases)
|SCO: 0.16|POS:369-400|MIS: 0|WOB: 0|
### * gene 1..1312
### * CDS 1..1017
### * mat_peptide 13..1014
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- CHKMHC1AA Chicken MHC class I alpha-chain mRNA, 3' end. --- (1312 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:692-724|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- CHKMHC1B Chicken MHC class I mRNA, exons 1-6. --- (1180 bases)
|SCO: 0.16|POS:424-455|MIS: 0|WOB: 0|
### * exon 333..605
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- CHKMHC1B Chicken MHC class I mRNA, exons 1-6. --- (1180 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:747-779|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- CHKMP Chicken mRNA for M-protein, complete cds. --- (5213 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1649-1676|MIS: 0|WOB: 0|
|CGUCAGU|GGC|UCCCU|GCC|ACGAGGAACA|
--- CHKNAKAT2 Chicken NA,K-ATPase alpha-2-subunit mRNA, complete cds. --- (3054 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:625-653|MIS: 0|WOB: 0|
|UCCGACU|CCC|CCGUCA|GGG|ACGAGUUGUC|
--- CHKNETRINA Chicken netrin-1 mRNA, complete cds. --- (2107 bases)
|SCO: 0.19|POS:160-185|MIS: 0|WOB: 0|
### $ sig_peptide 179..253
### $ CDS 179..1999
|CCCCGCU|GCG|CCG|CGC|ACGAUGCCGC|
--- CHKNETRINB Chicken netrin-2 mRNA, 3' end. --- (2767 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:2389-2418|MIS: 0|WOB: 0|
|GGGCCCU|GCC|CCUGGGC|GGC|ACGACCAGUC|
--- CHKOIH16 Chicken ovoinhibitor gene, exon 16. --- (206 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:104-135|MIS: 0|WOB: 0|
|AACCGUU|GGG|GAAUAUUGG|CCC|ACGAAGACUC|
--- CHKP22CBP Chicken calcium binding protein (P22) mRNA, complete cds. --- (1461 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:32-64|MIS: 0|WOB: 0|
|UCCCGGU|GGC|CCCGAACAGC|GCC|ACGAUCCGAU|
--- CHKPHOPHOS Gallus domesticus phosphotyrosyl phosphatase mRNA, complete cds. --- (4172 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:2034-2064|MIS: 0|WOB: 0|
|UUGGCGU|GCG|AUGCCUUC|CGC|ACGAAGGUGA|
--- CHKSCYCLO Chicken S-cyclophilin mRNA, complete cds. --- (885 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:198-224|MIS: 0|WOB: 0|
|CCCCGGU|GGC|CAAA|GCC|ACGAAGUUCU|
--- CHKSNDCPRO Chicken syndecan-3 proteoglycan mRNA, complete cds. --- (1372 bases)
|SCO: 0.17|POS:161-187|MIS: 0|WOB: 0|
### * exon 1..220
### * CDS 39..1256
|UGAUGAU|CCC|UUUG|GGG|ACGAUGAACU|
--- CHKSPAFAS Gallus gallus (clone B-FL1-1) MHC class I (B-F) cDNA, complete --- (1024 bases)
|SCO: 0.16|POS:369-400|MIS: 0|WOB: 0|
### * exon 277..549
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- CHKSPAFAS Gallus gallus (clone B-FL1-1) MHC class I (B-F) cDNA, complete --- (1024 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:692-724|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- CHKSRC Chicken c-src gene, complete cds (introns deleted). --- (1759 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:567-593|MIS: 0|WOB: 0|
|AGCCGCU|CGG|ACUC|CCG|ACGAGUGAUC|
--- CHKSRVCNTK Chicken non-tyrosin protein kinase (c-src) mRNA, complete cds. --- (3074 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:2598-2624|MIS: 0|WOB: 0|
|AGCCGCU|CGG|ACUC|CCG|ACGAGUGAUC|
--- CHKTENS Chicken tensin mRNA. --- (7392 bases)
|SCO: 0.16|POS:4344-4373|MIS: 0|WOB: 0|
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- CHKTENS Chicken tensin mRNA. --- (7392 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:842-872|MIS: 0|WOB: 0|
|GGGGGAU|GGC|CGGCGGUG|GCC|ACGAGGCAGU|
--- CHKTENSI Chicken tensin mRNA, complete cds. --- (7335 bases)
|SCO: 0.16|POS:4287-4316|MIS: 0|WOB: 0|
### * CDS 965..6166
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- CHKTENSI Chicken tensin mRNA, complete cds. --- (7335 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:818-848|MIS: 0|WOB: 0|
|GGGGGAU|GGC|GGCCGGUG|GCC|ACGAGGCAGU|
--- CHKTENSIN Chicken tensin mRNA sequence. --- (1164 bases)
|SCO: 0.16|POS:659-688|MIS: 0|WOB: 0|
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- CHKTENSN Gallus gallus tensin mRNA, 3' end. --- (6347 bases)
|SCO: 0.16|POS:3502-3531|MIS: 0|WOB: 0|
### * CDS 1..5381
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- CHKTNSN Gallus domesticus tensin mRNA sequence. --- (7124 bases)
|SCO: 0.16|POS:4320-4349|MIS: 0|WOB: 0|
### * CDS 965..6199
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- CHKTNSN Gallus domesticus tensin mRNA sequence. --- (7124 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:818-848|MIS: 0|WOB: 0|
|GGGGGAU|GGC|GGCCGGUG|GCC|ACGAGGCAGU|
--- CHKTRANGLU Chicken transglutaminase mRNA, complete cds. --- (3245 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:2433-2461|MIS: 0|WOB: 0|
|CAGCCCU|GCC|UGGCGC|GGC|ACGAACUCCA|
--- CHKVSCOC Gallus gallus violet sensitive cone opsin mRNA, complete cds. --- (1408 bases)
--- CHKVSCOC Gallus gallus violet sensitive cone opsin mRNA, complete cds. |SCO: 0.20|POS:90-121|MIS: 0|WOB: 0|
### $ CDS 102..1145
|UUCCCAU|CCG|CCAUGUCAU|CGG|ACGACGACUU|
--- CJLIMCRP C.japonica mRNA for LIM-domain protein CRP1. --- (927 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:855-880|MIS: 0|WOB: 0|
|GGCUCAU|CCC|AGU|GGG|ACGAGCAACG|
|SCO 0.17|POS:633-664|MIS: 0|WOB: 0|
|CAGGGCU|GGG|CUGAAGGAG|CCC|ACGAGGAGCA|
--- CRQMTGENOM Crossostoma lacustre complete mitochondrial genome. --- (16558 bases)
|SCO: 0.17|POS:1045-1073|MIS: 0|WOB: 0|
### * rRNA 968..1918
|CCUUAAU|CCC|UGCCCG|GGG|ACGAGGAGCG|
--- CRQMTGENOM Crossostoma lacustre complete mitochondrial genome. --- (16558 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:15654-15685|MIS: 0|WOB: 0|
|GCCCCAU|GGG|AGGACAUAA|CCC|ACGAAGGCUG|
--- CTEACTBB Grass carp (C.idella) beta-actin gene, complete cds. --- (4243 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1700-1726|MIS: 0|WOB: 0|
|GAUGUCU|GGG|ACGA|CCC|ACGAUGGAUG|
--- CYIACTBA Common carp (C.carpio) beta-actin gene, complete cds. --- (3994 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1662-1688|MIS: 0|WOB: 0|
|GAUGUCU|GGG|GCGA|CCC|ACGAUGGAUG|
--- CYIANTTRYP Cyprinus carpio alpha-1-antitrypsin mRNA, complete cds. --- (1356 bases)
|SCO: 0.17|POS:26-54|MIS: 0|WOB: 0|
|ACGGCCU|GGG|CUCAAA|CCC|ACGAAGGCCA|
--- D37900 Chicken mRNA for enolase alpha, complete cds. --- (1727 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:70-95|MIS: 0|WOB: 0|
|CAACAGU|GGG|AUU|CCC|ACGAGAAUCA|
--- D63170 Gallus domesticus DNA for the terminal heterochromatic region of --- (3840 bases)
|SCO: 0.17|POS:627-654|MIS: 0|WOB: 0|
### * misc_feature 1..3840
|UUCCCCU|GGG|AGCCU|CCC|ACGAUGUUGA|
--- D87121 Oryzias latipes adult female ovarian follicle mRNA for Cytochrome --- (2421 bases)
|SCO: 0.16|POS:2107-2133|MIS: 0|WOB: 0|
|GCCCCCU|GGC|UUCU|GCC|ACGACCCUCU|
--- D87122 Oryzias latipes adult female Ovarian follicle mRNA for Cytochrome --- (2302 bases)
|SCO: 0.16|POS:2005-2031|MIS: 0|WOB: 0|
|GCCCCCU|GGC|UUCU|GCC|ACGACCCUCU|
--- D88440 Gallus gallus mRNA for high molecular mass nuclear antigen, partial --- (3452 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:3169-3194|MIS: 0|WOB: 0|
|CUGGAAU|CCG|AGU|CGG|ACGAGGAGGA|
--- DRHER5 D.rerio mRNA for HER-5 protein. --- (1179 bases)
|SCO: 0.16|POS:357-383|MIS: 0|WOB: 0|
### * gene 25..642
### * CDS 25..642
|UAUUACU|GGC|AAGA|GCC|ACGAGUUUGG|
--- DRTKLELF1 D.rerio mRNA for tyrosine kinase ligand (elf-1). --- (2272 bases)
|SCO: 0.20|POS:844-872|MIS: 0|WOB: 0|
### * CDS 808..1395
|UGGGUCU|CCG|UAUGGU|CGG|ACGACAGGAU|
--- DRU67842 Danio rerio dlx1 mRNA, complete cds. --- (1211 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:1090-1119|MIS: 0|WOB: 0|
|UUCUUCU|CCG|GUGCGAC|CGG|ACGACCCUGG|
--- DRU82232 Danio rerio BMP2-4 mRNA, complete cds. --- (1236 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:980-1005|MIS: 0|WOB: 0|
|AUAGCCU|GGC|GGU|GCC|ACGAUCCACU|
--- DRZP47POU D.rerio mRNA for zp-47 POU gene. --- (3348 bases)
|SCO: 0.19|POS:525-552|MIS: 0|WOB: 0|
### * gene 41..1177
### * CDS 41..1177
|ACAGCAU|GCG|CGACG|CGC|ACGAGGACCA|
--- DUKNMDART1 Duck mRNA for N-methyl-D-aspartate receptor type1, complete cds. --- (3874 bases)
|SCO: 0.16|POS:271-299|MIS: 0|WOB: 0|
|UCCUCGU|GCC|GAAUUC|GGC|ACGAGCGGCG|
--- DUKNMDART1 Duck mRNA for N-methyl-D-aspartate receptor type1, complete cds. --- (3874 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:268-296|MIS: 0|WOB: 0|
|CGCUCGU|GCC|GAAUUC|GGC|ACGAGGAGUU|
--- EJAAB Entosphenus japonicus mRNA for aldolase, complete cds (EJM8). --- (2221 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1063-1095|MIS: 0|WOB: 0|
|GAAGCCU|GCC|CGUUGAUCUU|GGC|ACGACGCAUC|
--- EJRRN5 Lamprey (Entosphenus japonicus) 5S ribosomal RNA (oocyte major- and --- (120 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:29-55|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- EJRRN51 Lamprey (Entosphenus japonicus) 5S ribosomal RNA (oocyte --- (121 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:30-56|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- EYU18SRR42 Tarsiger cyanurus gene for 18S rRNA, partial sequence. --- (293 bases)
|SCO: 0.19|POS:170-196|MIS: 0|WOB: 0|
### * rRNA 1..293
|ACGCCCU|CGC|GGCG|GCG|ACGACCCAUU|
--- FIN18SRR44 Ficedula narcissina gene for 18S rRNA, partial sequence. --- (293 bases)
|SCO: 0.19|POS:170-196|MIS: 0|WOB: 0|
### * rRNA 1..293
|ACGCCCU|CGC|GGCG|GCG|ACGACCCAUU|
--- FR151J19 Fugu rubripes cosmid 151J19 covering the WT1, reticulocalbin and --- (45565 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:45406-45431|MIS: 0|WOB: 0|
|GAGCAGU|GGC|UCU|GCC|ACGAGGCGAC|
|SCO 0.19|POS:25256-25284|MIS: 0|WOB: 0|
|AUCGGCU|GCG|GAGGAG|CGC|ACGAGGGUGG|
--- FRU40758 Fugu rubripes dihydrolipoamide succinyltransferase gene, partial --- (2748 bases)
|SCO: 0.17|POS:370-398|MIS: 0|WOB: 0|
### $ CDS 386..460
|UUUGUGU|CCC|GUGCAG|GGG|ACGAUUUAGU|
--- FRU63807 Fugu rubripes growth hormone (GH) gene, complete cds. --- (8528 bases)
|SCO: 0.17|POS:2420-2450|MIS: 0|WOB: 0|
|CUCCUCU|CCC|CUAGUUAG|GGG|ACGAUGAAUU|
--- FRU63926 Fugu rubripes platelet-derived growth factor receptor beta --- (23196 bases)
|SCO: 0.16|POS:6450-6481|MIS: 0|WOB: 0|
### * mRNA 6359..6491
### * gene 1022..11409
### * CDS 6359..6491
### * exon 6359..6491
|AUGACCU|GGC|CUGGGAAAU|GCC|ACGAGACAAC|
--- FRVTRNASY F.rubripes DNA encoding for valyl-tRNA synthetase. --- (10251 bases)
|SCO: 0.16|POS:6277-6309|MIS: 0|WOB: 0|
### * intron 6266..6346
|CCAAAGU|GCC|ACAAUGGAGC|GGC|ACGACGGCAG|
--- FSCPSPA T.californica 43kd postsynaptic protein mRNA, complete cds. --- (1422 bases)
|SCO: 0.16|POS:351-378|MIS: 0|WOB: 0|
### * mRNA 1..1422
### * CDS 92..1261
|UCAACCU|GGC|GCGGG|GCC|ACGAGAAGCU|
--- FSCTRKA Torpedo californica receptor tyrosine kinase mRNA, complete cds. --- (3400 bases)
|SCO: 0.17|POS:2757-2783|MIS: 0|WOB: 0|
### * CDS 121..2961
|AUACUAU|GGG|AUGG|CCC|ACGAAGAGGU|
--- GDA2A5 G.gallus nicotinic acetylcholine receptor alpha2 gene exon 5. --- (1103 bases)
|SCO: 0.17|POS:715-744|MIS: 0|WOB: 0|
### * exon 11..1097
|UGCUGCU|CCC|CGCUGAG|GGG|ACGACGGGCC|
--- GGA7NAREC Chicken alpha7 subunit of nicotinic acetylcholine receptor. --- (2696 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:831-862|MIS: 0|WOB: 0|
|UGUUGCU|GGC|AUAAUUUCA|GCC|ACGAGUAACA|
--- GGAC01 Gallus gallus cytoplasmic beta-actin gene. --- (5046 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1637-1663|MIS: 0|WOB: 0|
|GAUGUCU|GGG|GCGA|CCC|ACGAUAGAUG|
|SCO 0.19|POS:1238-1266|MIS: 0|WOB: 0|
|AGUCCCU|GCG|CCCUCU|CGC|ACGAUUACCA|
--- GGASPAT Chicken mRNA for cytosolic aspartate aminotransferase (EC 2.6.1.1). --- (1791 bases)
|SCO: 0.19|POS:275-302|MIS: 0|WOB: 0|
### * CDS 25..1263
|CCCGCAU|CGC|CCUGG|GCG|ACGACAGCCC|
--- GGASPAT Chicken mRNA for cytosolic aspartate aminotransferase (EC 2.6.1.1). --- (1791 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:424-452|MIS: 0|WOB: 0|
|UGGUUCU|CCC|AUGUUG|GGG|ACGAGACGUA|
--- GGBF12MAJ G.gallus mRNA for MHC class I molecule (ID B-F12majo). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF12MIN G.gallus mRNA for MHC class I molecule (ID B-F12mino). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF12MR G.gallus mRNA for MHC class I glycoprotein (ID B-F12cDNA). --- (1289 bases)
|SCO: 0.16|POS:458-489|MIS: 0|WOB: 0|
### * CDS 39..1106
### * mat_peptide 102..1103
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF12MR G.gallus mRNA for MHC class I glycoprotein (ID B-F12cDNA). --- (1289 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:781-813|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGBF14MAJ G.gallus mRNA for MHC class I molecule (ID B-F14majo). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF19MAJ G.gallus mRNA for MHC class I molecule (ID B-F19majo). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF19MIN G.gallus mRNA for MHC class I molecule (ID B-F19mino). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF21MAJ G.gallus mRNA for MHC class I molecule (ID B-F21majo). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCGUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBF2MAJ G.gallus mRNA for MHC class I molecule (ID B-F2major). --- (537 bases)
|SCO: 0.16|POS:357-388|MIS: 0|WOB: 0|
### * mat_peptide 1..537
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBFF10 Chicken MHC class I (B-F) mRNA F10. --- (1276 bases)
|SCO: 0.16|POS:492-523|MIS: 0|WOB: 0|
### * CDS 70..1107
### * mat_peptide 136..1104
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGBFF10 Chicken MHC class I (B-F) mRNA F10. --- (1276 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:815-847|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGBLOCUS Gallus gallus (chicken) DNA sequence from a contig of cosmids cB12, --- (92863 bases)
|SCO: 0.16|POS:61330-61361|MIS: 0|WOB: 0|
### * misc_feature 60368..62039
### * mRNA 61239..61511
### * gene 60527..63036
### * CDS 61239..61511
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
|SCO: 0.16|POS:75258-75290|MIS: 0|WOB: 0|
### * misc_feature 75038..76817
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGBLOCUS Gallus gallus (chicken) DNA sequence from a contig of cosmids cB12, --- (92863 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:85402-85429|MIS: 0|WOB: 0|
|CUGAAGU|CCC|CAUCA|GGG|ACGAUCUCUG|
|SCO 0.16|POS:75685-75716|MIS: 0|WOB: 0|
### @ * mRNA 75535..75807
### @ * gene 74027..76519
### @ * CDS 75535..75807
|CUUCACU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
|SCO 0.16|POS:61766-61798|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
|SCO 0.17|POS:59081-59113|MIS: 0|WOB: 0|
|UGGGGUU|CCC|UGUCUGUGCG|GGG|ACGAUGCGGA|
--- GGCD3E1 G.gallus mRNA for CD3 epsilon protein, strain H.B21. --- (1861 bases)
|SCO: 0.16|POS:513-540|MIS: 0|WOB: 0|
### * gene 112..639
### * CDS 112..639
### * mat_peptide 175..636
|UGCUGCU|GGC|AGUCG|GCC|ACGAGCCCAG|
--- GGCD3E2 G.gallus mRNA for CD3 epsilon protein, strain CB. --- (528 bases)
|SCO: 0.16|POS:402-429|MIS: 0|WOB: 0|
### * CDS 1..528
### * gene 1..528
### * mat_peptide 64..525
|UGCUGCU|GGC|AGUCG|GCC|ACGAGCCCAG|
--- GGCD3E3 G.gallus mRNA for CD3 epsilon protein, strain H.B19. --- (528 bases)
|SCO: 0.16|POS:402-429|MIS: 0|WOB: 0|
### * gene 1..528
### * CDS 1..528
|UGCUGCU|GGC|AGUCG|GCC|ACGAGCCCAG|
--- GGCSRC Gallus gallus gene c-src producing protein pp60-c-src. This gene is --- (1759 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:567-593|MIS: 0|WOB: 0|
|AGCCGCU|CGG|ACUC|CCG|ACGAGUGAUC|
--- GGCTR3 Chicken mRNA for transferrin receptor 3'-noncoding region. --- (2632 bases)
|SCO: 0.16|POS:2513-2544|MIS: 0|WOB: 0|
|GAGACCU|GGC|GAGUGAGGA|GCC|ACGACAGCCG|
--- GGCYP1A4 G.gallus mRNA for CYP1A4. --- (2098 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:31-62|MIS: 0|WOB: 0|
|AACCUUU|GGG|UGCUGCUGU|CCC|ACGAGGGCCC|
--- GGF12MIMR G.gallus mRNA for MHC class I glycoprotein (ID B-F12cDNA). --- (1529 bases)
|SCO: 0.16|POS:433-464|MIS: 0|WOB: 0|
### * mat_peptide 77..1086
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGF12MIMR G.gallus mRNA for MHC class I glycoprotein (ID B-F12cDNA). --- (1529 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:764-796|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCGC|
--- GGF19MAMR G.gallus major class I glycoprotein (ID B-F19cDNA). --- (1490 bases)
|SCO: 0.16|POS:410-441|MIS: 0|WOB: 0|
### * CDS 1..1058
### * mat_peptide 54..1055
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGF19MAMR G.gallus major class I glycoprotein (ID B-F19cDNA). --- (1490 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:733-765|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGF19MIMR G.gallus mRNA for MHC class I glycoprotein (ID B-F19cDNA). --- (940 bases)
|SCO: 0.16|POS:150-181|MIS: 0|WOB: 0|
### * mat_peptide 1..795
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGF19MIMR G.gallus mRNA for MHC class I glycoprotein (ID B-F19cDNA). --- (940 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:473-505|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGF4MAMR G.gallus major class I glycoprotein (ID B-F4cDNAm). --- (1169 bases)
|SCO: 0.16|POS:1138-1166|MIS: 0|WOB: 0|
### * 3'UTR 700..1169
|UUCUCGU|GCC|GAAUUC|GGC|ACGAGCUCGU|
--- GGF4MAMR G.gallus major class I glycoprotein (ID B-F4cDNAm). --- (1169 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1135-1163|MIS: 0|WOB: 0|
|AGCUCGU|GCC|GAAUUC|GGC|ACGAGAACAU|
|SCO 0.16|POS:374-406|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- GGGFBPA G.gallus gammaFBP-A mRNA. --- (3597 bases)
|SCO: 0.16|POS:995-1022|MIS: 0|WOB: 0|
### * CDS 220..2217
|CCUCCUU|GCC|CCCGC|GGC|ACGACAGCCC|
|SCO: 0.16|POS:2341-2370|MIS: 0|WOB: 0|
|GCUGGGU|GGC|GCGUCCC|GCC|ACGAGCGUGG|
--- GGGFBPB G.gallus gammaFBP-B mRNA. --- (3551 bases)
|SCO: 0.16|POS:949-976|MIS: 0|WOB: 0|
### * CDS 246..2171
|CCUCCUU|GCC|CCCGC|GGC|ACGACAGCCC|
|SCO: 0.16|POS:2295-2324|MIS: 0|WOB: 0|
|GCUGGGU|GGC|GCGUCCC|GCC|ACGAGCGUGG|
--- GGGFBPC G.gallus gammaFBP-C mRNA. --- (3411 bases)
|SCO: 0.16|POS:809-836|MIS: 0|WOB: 0|
### * CDS 1..2031
|CCUCCUU|GCC|CCCGC|GGC|ACGACAGCCC|
|SCO: 0.16|POS:2155-2184|MIS: 0|WOB: 0|
|GCUGGGU|GGC|GCGUCCC|GCC|ACGAGCGUGG|
--- GGHISH1 Chicken histone H1 gene. --- (2201 bases)
|SCO: 0.16|POS:1848-1879|MIS: 0|WOB: 0|
|CCGCCCU|GGC|CGAGGAUUG|GCC|ACGAGGAGCC|
--- GGHMG14A5 G.gallus HMG-14a gene exon 5. --- (770 bases)
|SCO: 0.19|POS:162-192|MIS: 0|WOB: 0|
|AGAACGU|GCG|AAUGAAGG|CGC|ACGAGUUGGA|
--- GGHSP90 G.gallus hsp90beta gene. --- (5699 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:3569-3599|MIS: 0|WOB: 0|
|GUCGGGU|CCC|GCGGGUUG|GGG|ACGAUGUCGA|
--- GGHSP90B G.gallus hsp 90 beta mRNA for heat shock protein 90 beta. --- (2633 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:218-248|MIS: 0|WOB: 0|
|GUCGGGU|CCC|GCGGGUUG|GGG|ACGAUGUCGA|
--- GGLR11 G.gallus mRNA for mosaic protein LR11. --- (4775 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:65-91|MIS: 0|WOB: 0|
|UGUCUCU|GGC|CAAG|GCC|ACGAUCACGU|
--- GGLRPA2MR G.gallus mRNA for LRP/alpha-2-macroglobulin receptor. --- (15598 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:6593-6623|MIS: 0|WOB: 0|
|CUCAGCU|GGC|UCUUGACC|GCC|ACGAUCACCU|
--- GGNGCAM Chicken mRNA for Ng-CAM (neuron-glia cell adhesion molecule). --- (3991 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1845-1873|MIS: 0|WOB: 0|
|CCGGGAU|GGG|GGGCGG|CCC|ACGACUCUGA|
--- GGNGCAMVA G.gallus mRNA for Ng-CAM neuron-glia cell adhesion molecule --- (3843 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1799-1831|MIS: 0|WOB: 0|
|CCCGGAU|GGG|GCCGGGGCGG|CCC|ACGACUCUGA|
--- GGNNARA7A G.gallus mRNA for neuronal nicotinic acetylcholine receptor alpha-7 --- (2037 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:935-966|MIS: 0|WOB: 0|
|UGUUGCU|GGC|AUAAUUUCA|GCC|ACGAGUAACA|
--- GGRIHBGEN G.gallus RIHB gene. --- (3886 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:1059-1091|MIS: 0|WOB: 0|
|CAUCCUU|CGC|UCUCGUAAGC|GCG|ACGAGCCCUC|
--- GGTENSINA G.gallus for tensin gene. --- (6347 bases)
|SCO: 0.16|POS:3502-3531|MIS: 0|WOB: 0|
### * CDS 1..5381
|AGUCAGU|GGC|CAGGACA|GCC|ACGACUGGCA|
--- GGTGFB3 Chicken gene for transforming growth factor-beta3. --- (4130 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1720-1752|MIS: 0|WOB: 0|
|CCUCCCU|CCC|AUGACGUCCC|GGG|ACGAGGCUCG|
--- GGTRNKG Chicken embryo tRNA-Lys-2 gene. --- (379 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:250-279|MIS: 0|WOB: 0|
|CCAACGU|GGG|GCUCGAA|CCC|ACGACCCUGA|
--- GGU09222 Gallus gallus White Leghorn vitellogenin gene-binding protein --- (600 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:307-332|MIS: 0|WOB: 0|
|GGCACCU|CGG|GAC|CCG|ACGACACCGA|
--- GGU17606 Gallus gallus chS-Rex-b mRNA, complete cds. --- (3187 bases)
|SCO: 0.16|POS:966-998|MIS: 0|WOB: 0|
### * mRNA 1..3187
### * CDS 136..2418
|CAAAUCU|GGC|CUGAAGCCGA|GCC|ACGAGGUGGU|
--- GGU47273 Gallus gallus tissue transglutaminase mRNA, complete cds. --- (2811 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1988-2016|MIS: 0|WOB: 0|
|CAGCCCU|GCC|UGGCGC|GGC|ACGAACUCCA|
--- GGU72394 Gallus gallus ephrin-B1 mRNA, complete cds. --- (1938 bases)
|SCO: 0.17|POS:242-272|MIS: 0|WOB: 0|
### $ CDS 266..1270
|GUGCCGU|CCC|GCCGCCGA|GGG|ACGAUGGCGC|
--- GGU83593 Gallus gallus aggrecan gene, promoter region. --- (1875 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:343-371|MIS: 0|WOB: 0|
|GUGUUGU|GGC|UCCAAA|GCC|ACGAGGUGGU|
--- GGU88299 Gallus gallus MHC class I heavy chain B-F mRNA (B-A4 variant --- (678 bases)
|SCO: 0.16|POS:339-370|MIS: 0|WOB: 0|
### * gene 1..678
### * CDS 1..678
|CUUCAUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- GGY14827 Gallus gallus RNA for CpG island, clone 1. --- (246 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:172-198|MIS: 0|WOB: 0|
|CUCGUUU|CGG|AAAG|CCG|ACGAGCAGAU|
--- GGY15087 Gallus gallus ICSBP gene, promoter sequence. --- (1800 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1320-1351|MIS: 0|WOB: 0|
|UUUCCUU|GCC|CGCAGGCCU|GGC|ACGAGGUGCU|
--- GGZ95168 G.gallus microsatellite DNA (LEI0275 (= EC06A10)). --- (310 bases)
|SCO: 0.17|POS:276-305|MIS: 0|WOB: 0|
### * satellite 1..310
|CCGAUGU|GGG|GCUCGAA|CCC|ACGAACUGUG|
--- GM10114 G.morhua L. mRNA for Ig heavy chain, rearranged. --- (399 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:147-172|MIS: 0|WOB: 0|
|CUUUUUU|GCC|AUC|GGC|ACGAAUAUAA|
--- GMMITGEN G.morhua complete mitochondrial DNA sequence. --- (16696 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:1058-1087|MIS: 0|WOB: 0|
|GGGCAGU|CCG|AUUUGCA|CGG|ACGACUUCUC|
--- GMRRNA01 Gadus morhua 18S ribosomal RNA gene, partial sequence. --- (832 bases)
|SCO: 0.19|POS:315-347|MIS: 0|WOB: 0|
### * rRNA 1..832
|GAUCGCU|CGC|CCUCGCGGCG|GCG|ACGACUCAUU|
|SCO: 0.19|POS:321-347|MIS: 0|WOB: 0|
### * rRNA 1..832
|UCGCCCU|CGC|GGCG|GCG|ACGACUCAUU|
--- GMU11437 Gadus morhua 18S ribosomal RNA sequence, 5' region. --- (535 bases)
|SCO: 0.19|POS:267-299|MIS: 0|WOB: 0|
### * rRNA 1..535
|GAUCGCU|CGC|CCUCGCGGCG|GCG|ACGACUCAUU|
|SCO: 0.19|POS:273-299|MIS: 0|WOB: 0|
### * rRNA 1..535
|UCGCCCU|CGC|GGCG|GCG|ACGACUCAUU|
--- GU12330 Cricetulus griseus sterol regulatory element binding protein-2 --- (4987 bases)
|SCO: 0.17|POS:1653-1681|MIS: 0|WOB: 0|
### * gene 159..3578
### * CDS 159..3578
|CUGCAGU|GGG|GAGGGG|CCC|ACGACACUGA|
--- HDU94797 Harpactes diardii cytochrome b gene, mitochondrial gene encoding --- (1143 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:380-411|MIS: 0|WOB: 0|
|UCCUCAU|GGG|AGUACGUAA|CCC|ACGAAGGCAG|
--- ICHVITGN Lamprey vitellogenin mRNA, complete cds. --- (5976 bases)
|SCO: 0.17|POS:3030-3055|MIS: 0|WOB: 0|
### * CDS 84..5555
### * mat_peptide 126..5552
|CGCCCAU|GGG|CGU|CCC|ACGAGUUCUC|
--- LARA2M Lampetra japonica mRNA for alpha-2-macroglobulin, complete cds. --- (4841 bases)
|SCO: 0.17|POS:449-481|MIS: 0|WOB: 0|
### * CDS 145..4656
|UCACGGU|CCC|CGACGUCCAG|GGG|ACGACGUACG|
|SCO: 0.19|POS:3872-3901|MIS: 0|WOB: 0|
### * CDS 145..4656
|GGCAACU|CGC|CGCCUCG|GCG|ACGAGCUCCA|
--- LHU68571 Leiopelma hochstetteri B chromosome probe 34A16649. --- (649 bases)
|SCO: 0.16|POS:328-353|MIS: 0|WOB: 0|
|UCGUGUU|GGC|UUA|GCC|ACGAUAGCUA|
--- LJA5SRR Lampetra japonica 5S rRNA, partial sequence. --- (120 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:29-55|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- LRRN5S Lampetra reissneri 5S rRNA. --- (120 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:29-55|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- M24367 Gallus sp. delta-aminolevulinate synthase mRNA, complete cds. --- (1682 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1222-1252|MIS: 0|WOB: 0|
|UCCGCAU|CCC|ACCUGACG|GGG|ACGAUGUGGC|
--- MFITS Loach (M. fossilis L.) rDNA for internal transcribed spacer. --- (1420 bases)
|SCO: 0.17|POS:1164-1194|MIS: 0|WOB: 0|
### * misc_feature 1046..1420
|GCCGAAU|CCC|CGCCGCGC|GGG|ACGAGGGAAA|
--- MFRN01 Misgurnus fossilis 5S rRNA isolated from liver. --- (120 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:29-55|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- MGU13977 Meleagris gallopavo adrenergic beta-4c receptor mRNA, complete cds. --- (1533 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:216-242|MIS: 0|WOB: 0|
|GCGUCUU|GGC|GAUG|GCC|ACGAUCACCA|
--- MGU13978 Meleagris gallopavo beta-4C-adrenergic receptor (ADRB4C) gene, --- (3445 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1019-1045|MIS: 0|WOB: 0|
|GCGUCUU|GGC|GAUG|GCC|ACGAUCACCA|
--- MGU43446 Meleagris gallopavo glucagon receptor mRNA, complete cds. --- (649 bases)
|SCO: 0.16|POS:201-226|MIS: 0|WOB: 0|
### * CDS 15..623
|AGGCACU|GGC|UCA|GCC|ACGAGGCAGC|
--- MIAACYB A.alburnus mitochondrial gene encoding cytochrome b. --- (1140 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:377-408|MIS: 0|WOB: 0|
|UCCCCAU|GGG|AGUACAUAG|CCC|ACGAAGGCUG|
--- MICCCG C.carpio complete mitochondrial genome DNA. --- (16575 bases)
|SCO: 0.17|POS:1075-1104|MIS: 0|WOB: 0|
### * rRNA 998..1948
### * gene 998..1948
|CCUCAAU|CCC|CCCACCC|GGG|ACGAGGAGCG|
--- MISADLOO S.alpinus mitochondrial DNA of D-loop region. --- (645 bases)
|SCO: 0.17|POS:520-549|MIS: 0|WOB: 0|
### * rRNA 443..645
|CCUUAAU|CCC|CUGCCCG|GGG|ACGAGGAGCC|
--- MISMCB33 Scytalopus magellanicus mitochondrial gene for cytochrome b, exon --- (924 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:281-312|MIS: 0|WOB: 0|
|UCCUCAU|GGG|AGAACAUAG|CCC|ACGAAAGCAG|
--- MSI18SRR43 Monticola solitarius gene for 18S rRNA, partial sequence. --- (293 bases)
|SCO: 0.19|POS:170-196|MIS: 0|WOB: 0|
### * rRNA 1..293
|ACGCCCU|CGC|GGCG|GCG|ACGACCCAUU|
--- MTRACOMPL Rhea americana complete mitochondrial genome. --- (16710 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:15910-15936|MIS: 0|WOB: 0|
|UCACAUU|CCC|GUAC|GGG|ACGAUUAAAU|
--- NVMYF5 N.viridescens Myf-5 mRNA. --- (1339 bases)
|SCO: 0.20|POS:170-200|MIS: 0|WOB: 0|
### * gene 61..831
### * CDS 61..831
|GCCGCUU|CCG|GGUGCACC|CGG|ACGAGCUGCA|
--- OEU17270 Opsopoeodus emilae mitochondrial cytochrome b gene, complete cds. --- (1141 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:377-408|MIS: 0|WOB: 0|
|GCCCCAU|GGG|AGUACGUAG|CCC|ACGAAGGCUG|
--- OKPROLAC O.keta prolactin mRNA. --- (737 bases)
|SCO: 0.17|POS:182-210|MIS: 0|WOB: 0|
### * CDS 25..657
### * mat_peptide 94..654
|CUCACUU|CCC|ACCAAU|GGG|ACGAGUGAUG|
--- OMLYRNA O.mykiss mRNA for lysozyme II. --- (1021 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:709-737|MIS: 0|WOB: 0|
|GAUAUAU|GGC|CAAUAU|GCC|ACGACCAAGG|
--- OMTIGHGEN Oreochromis mossambicus tigH gene. --- (5570 bases)
|SCO: 0.17|POS:3758-3784|MIS: 0|WOB: 0|
### * gene 1..5149
### * intron 3755..3849
|AGAAUCU|GGG|CUCC|CCC|ACGAGAAGGG|
--- ONHMTCG Oncorhynchus mykiss mitochondrion complete genome. --- (16642 bases)
|SCO: 0.17|POS:1149-1177|MIS: 0|WOB: 0|
### * rRNA 1072..2015
### * gene 1072..2015
|CCUUAAU|CCC|UGCCCG|GGG|ACGAGGAGCC|
--- ONHPROLA O.tschawytscha (chinook salmon) prolactin mRNA, complete cds. --- (1148 bases)
|SCO: 0.17|POS:176-204|MIS: 0|WOB: 0|
### * mRNA 1..1148
### * CDS 19..654
### * mat_peptide 88..651
|CUCACUU|CCC|ACCAAU|GGG|ACGAGUGAUG|
--- ONHSPRL Oncorhynchus keta mRNA for prolactin precursor, complete cds. --- (940 bases)
|SCO: 0.17|POS:198-226|MIS: 0|WOB: 0|
### * CDS 41..673
### * mat_peptide 110..670
|CUCACUU|CCC|ACCAAU|GGG|ACGAGUGAUG|
--- PGSGHA Pangasianodon gigas growth hormone (GH) mRNA, complete cds. --- (1176 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:359-386|MIS: 0|WOB: 0|
|UCUUGCU|GGG|GAACU|CCC|ACGACUCGAU|
--- PRUAA3 P.reticulata Mhc gene, Class IA;. --- (856 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:689-721|MIS: 0|WOB: 0|
|GGAAGGU|CCC|AUCAUUGUUG|GGG|ACGAUCUCUC|
--- PW5SRNA P.waltii somatic 5S RNA. --- (120 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:29-55|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- QULINSB Coturnix japonica insertion sequence. --- (657 bases)
|SCO: 0.16|POS:293-320|MIS: 0|WOB: 0|
### * misc_recomb 1..657
|CAGCUCU|GGC|AAUCA|GCC|ACGAGUUCCU|
--- QULMHC Japanese quail mRNA for major histocompatibility complex class I --- (1245 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:762-794|MIS: 0|WOB: 0|
|GGUAGGU|GCC|GUCGCUGUUG|GGC|ACGAUGCCCC|
--- REU19208 Raja erinacea clone RRLC8 type I immunoglobulin light chain --- (1088 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:803-828|MIS: 0|WOB: 0|
|AGCCGAU|GCC|AAU|GGC|ACGAACUCAG|
--- S43620 c-src {5' region} [chickens, Genomic, 1517 nt]. --- (1517 bases)
|SCO: 0.17|POS:676-703|MIS: 0|WOB: 0|
### * gene 1..1517
|CGGGCGU|CCC|UGCUG|GGG|ACGAGGGCGC|
--- S46000 TGF beta 3=transforming growth factor-beta 3 {5'region, promoter} --- (1829 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:946-978|MIS: 0|WOB: 0|
|CCUCCCU|CCC|AUGACGUCCC|GGG|ACGAGGCUCG|
--- S53164 alpha B-crystallin [chickens, lens epithelial cells, mRNA, 1251 --- (1251 bases)
|SCO: 0.16|POS:705-735|MIS: 0|WOB: 0|
|AAGUGUU|GGC|UCAAGGAA|GCC|ACGAAAGUUU|
--- S56884 Krox-20=XKrox-20 [Xenopus laevis, embryo, mRNA, 1470 nt]. --- (1470 bases)
|SCO: 0.19|POS:1167-1194|MIS: 0|WOB: 0|
### * gene 110..1375
### * CDS 110..1375
|GAAAGUU|CGC|GCGGA|GCG|ACGAGCGCAA|
--- S65267 drebrin A {alternatively spliced, clone Dcb21} [chickens, postnatal --- (1919 bases)
|SCO: 0.16|POS:62-93|MIS: 0|WOB: 0|
### * gene 1..1565
### * CDS 1..1565
|CGAGAAU|GCC|GAGCCCGUG|GGC|ACGACCUACC|
--- S66606 PRLII=prolactin II [Oncorhynchus tschawytscha=chinook salmon, --- (6367 bases)
|SCO: 0.17|POS:3795-3823|MIS: 0|WOB: 0|
### * mRNA 3791..3898
### * gene 2466..4956
### * CDS 3791..3898
|CUCACUU|CCC|ACCAAU|GGG|ACGAGUGAUG|
--- S72373 Tlx=tailless homolog [chickens, embryo, mRNA, 2700 nt]. --- (2700 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:788-820|MIS: 0|WOB: 0|
|UUGGGGU|GGG|CUGCGCCAGG|CCC|ACGAGGGCCU|
--- S73106 5S rRNA {clone pAS5Sa12, tandem repeat} [Salmo salar=Atlantic --- (624 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:6-32|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- S73107 5S rRNA {clone pAS-5Sb1, tandem repeat} [Salmo salar=Atlantic --- (255 bases)
---------- complementary sequence ----------
|SCO 0.20|POS:6-32|MIS: 0|WOB: 0|
|UUAGCUU|CCG|AGAU|CGG|ACGAGAUCGG|
--- S78682 BFIV21=major histocompatibility complex class I glycoprotein --- (1274 bases)
|SCO: 0.16|POS:451-482|MIS: 0|WOB: 0|
### * gene 32..1099
### * CDS 32..1099
|CUUCGUU|GCC|UUCGACAAA|GGC|ACGAUGACGU|
--- S78682 BFIV21=major histocompatibility complex class I glycoprotein --- (1274 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:774-806|MIS: 0|WOB: 0|
|GGUACGU|GCC|GUCGCCGUUG|GGC|ACGAUGCCCC|
--- S83711 Schwann cell myelin protein [quail, mRNA, 2715 nt]. --- (2715 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1649-1675|MIS: 0|WOB: 0|
|UGACGAU|GGC|GAAG|GCC|ACGACGGCAC|
--- SAU02973 Squalus acanthias proteolipid protein DM alpha mRNA, complete cds. --- (1445 bases)
|SCO: 0.16|POS:309-335|MIS: 0|WOB: 0|
### * CDS 217..954
|UUUCUGU|GGC|UGUG|GCC|ACGAGGCCCU|
--- SBU40530 Simochromis babaulti haplotype BAB7 mitochondrial control region, --- (387 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:270-301|MIS: 0|WOB: 0|
|UAAAUAU|GGG|AAAUGAAUU|CCC|AVSAGGAUGG|
--- SKTIGHB R.erinacea Ig unproductively rearranged mu-chain mRNA. --- (1192 bases)
|SCO: 0.17|POS:960-988|MIS: 0|WOB: 0|
|ACAUUAU|CCC|CUUGAA|GGG|ACGACCUGAC|
--- SMOPROLACT Rainbow trout prolactin mRNA, complete cds. --- (1131 bases)
|SCO: 0.17|POS:187-215|MIS: 0|WOB: 0|
### * CDS 30..662
### * mat_peptide 99..659
|CUCACUU|CCC|ACCAAU|GGG|ACGAGUGAUG|
--- SSMITOCH1 Salmo salar mitochondrion tRNA-Phe, 12S rRNA, tRNA-Val, 16S rRNA, --- (2841 bases)
|SCO: 0.17|POS:146-172|MIS: 0|WOB: 0|
### * rRNA 69..1016
|CCUUAAU|CCC|UGCC|GGG|ACGAGGAGCC|
--- TFU53213 Tetraodon fluviatilis JAK1 tyrosine kinase (JAK1) gene, complete --- (16977 bases)
|SCO: 0.16|POS:1465-1492|MIS: 0|WOB: 0|
|GAUGGCU|GCC|AACUU|GGC|ACGAAGAACC|
--- TILGH1X Tilapia nilotica growth hormone (GH1) gene, exons 1-6. --- (3486 bases)
|SCO: 0.17|POS:1678-1704|MIS: 0|WOB: 0|
### * intron 1674..1769
|GACAUCU|GGG|CUCC|CCC|ACGAGAAGGG|
--- TILGH2X Tilapia nilotica growth hormone (GH2) gene, exons 1-6. --- (3165 bases)
|SCO: 0.17|POS:1361-1387|MIS: 0|WOB: 0|
### * intron 1357..1448
|GACAUCU|GGG|CUCC|CCC|ACGAGAAGGG|
--- TILGROHORM Tilapia nilotica growth hormone gene, complete cds. --- (2361 bases)
|SCO: 0.17|POS:553-579|MIS: 0|WOB: 0|
### * intron 549..644
|GACAUCU|GGG|CUCC|CCC|ACGAGAAGGG|
--- TMCRETRA T.marmorata creatine transporter mRNA. --- (2154 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1263-1294|MIS: 0|WOB: 0|
|CAGACCU|GGC|CCUGACUCU|GCC|ACGACCGAGA|
--- TTGHR Tuna mRNA for growth hormone. --- (911 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:360-387|MIS: 0|WOB: 0|
|AACGGCU|GGG|GAACU|CCC|ACGAUUCCAC|
--- U14162 Stenotomus chrysops cytochrome P450 1A mRNA, complete cds. --- (1566 bases)
|SCO: 0.16|POS:444-475|MIS: 0|WOB: 0|
### * CDS 1..1566
|CUCCUUY|GCC|ACCUUGGAA|GGC|ACGACGCCAG|
--- U33698 Campostoma anomalum 18S ribosomal RNA gene, partial sequence. --- (170 bases)
|SCO: 0.19|POS:139-165|MIS: 0|WOB: 0|
### * rRNA 1..170
|UGCGCCU|CGC|GGCG|GCG|ACGACUCAUU|
--- U72484 Fugu rubripes RNA helicase (RNA-H) gene, partial cds; calcium --- (61901 bases)
|SCO: 0.19|POS:10720-10746|MIS: 0|WOB: 0|
|AUGAGGU|CGC|UGUG|GCG|ACGACCUCCC|
--- XCRNA3 Xenopus clivii nontranscribed spacer fragment between the 28S and --- (179 bases)
|SCO: 0.17|POS:145-174|MIS: 0|WOB: 0|
|CCCCUGU|CCC|UCCGGGG|GGG|ACGAGGCGUC|
--- XELCALMO Xenopus laevis calmodulin gene. --- (1068 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:605-636|MIS: 0|WOB: 0|
|CACUAGU|GCG|GAGGAGAAG|CGC|ACGAGGAGGG|
--- XELEPHRTK Xenopus laevis eph receptor tyrosine kinase subfamily mRNA, 3' end --- (1531 bases)
|SCO: 0.19|POS:1027-1054|MIS: 0|WOB: 0|
|GCUGAUU|GCG|UGACA|CGC|ACGAAGGACA|
--- XELH1C2 xenopus laevis h1 histone gene, h1c subtype, clone xlhw2. --- (1070 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:631-660|MIS: 0|WOB: 0|
|GUUUCUU|GGC|UUUGGGC|GCC|ACGAGCUUCU|
--- XELH1C8 xenopus laevis h1 histone gene, h1c subtype, clone xlhw8. --- (1511 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:628-657|MIS: 0|WOB: 0|
|GUUUCUU|GGC|UUUGGGC|GCC|ACGAGCUUCU|
--- XELIGHAM X.laevis Ig rearranged H-chain mRNA V-region (V5-D1-J7-C), partial --- (420 bases)
|SCO: 0.17|POS:160-192|MIS: 0|WOB: 0|
### * CDS 1..420
### * mat_peptide 61..420
|AUGCAUU|GGG|UUCGACAAGC|CCC|ACGAGGAGGA|
--- XELIGHK X.laevis Ig rearranged H chain (26051 VH9) V-region mRNA (V-D-J-C) --- (576 bases)
|SCO: 0.17|POS:154-186|MIS: 0|WOB: 0|
### * CDS 1..576
### * mat_peptide 57..576
|AUGCAUU|GGG|UUCGACAAGC|CCC|ACGAGGAGGA|
--- XELREL X.laevis Xrel1 mRNA, complete cds. --- (1981 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:885-914|MIS: 0|WOB: 0|
|UCUGCUU|GGG|AAAAUAU|CCC|ACGAGCUUCC|
--- XELSUP35A Xenopus laevis (clone XLSUP35) SUP35 mRNA, 3' end of cds. --- (2304 bases)
|SCO: 0.17|POS:1751-1779|MIS: 0|WOB: 0|
### * mRNA 1..2304
### * gene 1..2304
### * CDS 1..1845
|AAGAUUU|CCC|UCAGAU|GGG|ACGAUUUACC|
--- XELWNT10A Xenopus laevis secreted protein, wnt-1 related (wnt-10) mRNA, --- (351 bases)
|SCO: 0.17|POS:120-150|MIS: 0|WOB: 0|
### * gene 1..351
### * CDS 1..351
|GAAUAGU|GGG|GCCUUUCA|CCC|ACGACUGAAC|
--- XELWNT11 Xenopus laevis maternal protein (wnt-11) mRNA, complete cds. --- (2194 bases)
|SCO: 0.16|POS:88-117|MIS: 0|WOB: 0|
|UGGCACU|GCC|CUAGCUG|GGC|ACGAGCAGCU|
--- XELXOTCH X.laevis Xotch protein mRNA, complete cds. --- (9166 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:751-777|MIS: 0|WOB: 0|
|UGGAUCU|GCC|UGCU|GGC|ACGAAUCCCC|
--- XELXTLDP Xenopus laevis mRNA for Xtld protein, complete cds. --- (3430 bases)
|SCO: 0.16|POS:41-69|MIS: 0|WOB: 0|
|AGCUCGU|GCC|GAAUUC|GGC|ACGAGCCUCC|
--- XELXTLDP Xenopus laevis mRNA for Xtld protein, complete cds. --- (3430 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:38-66|MIS: 0|WOB: 0|
|GGCUCGU|GCC|GAAUUC|GGC|ACGAGCUCUC|
--- XLACTA2 Xenopus laevis alpha2 gene for sarcomeric actin (skeletal muscle). --- (2355 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:578-603|MIS: 0|WOB: 0|
|GUGACGU|GGG|CGA|CCC|ACGAUAGAUG|
--- XLAJ85 Xenopus laevis mRNA for Nedd4 protein. --- (3578 bases)
|SCO: 0.17|POS:1657-1683|MIS: 0|WOB: 0|
### * gene 103..3018
### * CDS 103..3018
### $ misc_feature 1597..1674
|ACCACAU|GGG|AGGA|CCC|ACGACUAAAG|
--- XLBGL1R Xenopus laevis mRNA for larval beta I globin. --- (598 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:225-250|MIS: 0|WOB: 0|
|CCUUCUU|GCC|AUG|GGC|ACGAACCUUG|
--- XLBGL3 Xenopus laevis larval gene for beta1-globin. --- (2972 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:1036-1061|MIS: 0|WOB: 0|
|CCUUCUU|GCC|AUG|GGC|ACGAACCUUG|
--- XLGSPK X.laevis mRNA for gastrula-specific protein kinase. --- (1887 bases)
|SCO: 0.16|POS:1267-1298|MIS: 0|WOB: 0|
|AGAAUCU|GCC|CAAGUGGAA|GGC|ACGAGUAGGA|
--- XLH1CG X.laevis H1C gene for linker histone H1C. --- (1793 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:904-933|MIS: 0|WOB: 0|
|GUUUCUU|GGC|UUUGGGC|GCC|ACGAGCUUCU|
--- XLLARGASA X.laevis mRNA for L-arginase. --- (1275 bases)
---------- complementary sequence ----------
|SCO 0.16|POS:35-63|MIS: 0|WOB: 0|
|UCACUCU|GCC|AAAUUC|GGC|ACGAGAGAAU|
--- XLPOU3 X.laevis XlPOU3 mRNA for a POU-domain protein. --- (2496 bases)
|SCO: 0.17|POS:550-582|MIS: 0|WOB: 0|
### * gene 68..1216
### * CDS 68..1216
|CCACCAU|GGG|CUCAGGGAUU|CCC|ACGACGACCA|
--- XLU13962 Xenopus laevis Wee1A kinase (Xe-Wee1A) mRNA, complete cds. --- (2039 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:876-907|MIS: 0|WOB: 0|
|UGCCCAU|GCG|GAGUAAUAA|CGC|ACGACGUGGG|
--- XLU17394 Xenopus laevis polyadenylation factor 64 kDa subunit (CstF) mRNA, --- (1680 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:752-783|MIS: 0|WOB: 0|
|AGGAUUU|CCC|AUUGGUGCU|GGG|ACGACACCCU|
--- XLU23535 Xenopus laevis epithelial sodium channel, alpha subunit --- (2773 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1791-1820|MIS: 0|WOB: 0|
|UGGCGCU|GGG|AGAGAUC|CCC|ACGAGGAAUG|
--- XLU63711 Xenopus laevis xefiltin mRNA, complete cds. --- (2125 bases)
---------- complementary sequence ----------
|SCO 0.17|POS:1841-1869|MIS: 0|WOB: 0|
|CCCCAGU|GGG|CCCUGA|CCC|ACGAGUCCGA|
--- ZEFDMGRASP Danio rerio transmembrane glycoprotein (DM-GRASP) mRNA, complete --- (2057 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:1988-2020|MIS: 0|WOB: 0|
|ACAUUCU|GCG|AUGCGGUAUG|CGC|ACGAGCAGCC|
|SCO 0.19|POS:1988-2015|MIS: 0|WOB: 0|
|CUGCGAU|GCG|GUAUG|CGC|ACGAGCAGCC|
--- ZEFLIM5R Danio rerio LIM class homeodomain protein (lim5) mRNA, complete --- (2016 bases)
---------- complementary sequence ----------
|SCO 0.19|POS:515-544|MIS: 0|WOB: 0|
|CCUUGCU|GCG|CGCUCUU|CGC|ACGAGAUCGC|
--- ZEFOTX3 Zebrafish otx3 mRNA for otx homeoprotein, complete cds. --- (1251 bases)
|SCO: 0.17|POS:314-340|MIS: 0|WOB: 0|
### * gene 235..1251
### * CDS 235..1251
|CCUCUGU|GGG|AUAU|CCC|ACGAAUCCUC|